publications
For the most up to date publication list, please visit my ORCID (0000-0002-0271-2576) page.
publications in scientific journals
14. Gomes MGM, Ferreira MU, Corder RM, King JG, Souto-Maior C, Penha-Gonçalves C, Gonçalves G, Chikina M, Pegden W, Aguas R. “Individual variation in susceptibility or exposure to SARS-CoV-2 lowers the herd immunity threshold”. Journal of theoretical biology 2022;540: 111063. [doi: 10.1016/j.jtbi.2022.111063]
13. Souto-Maior C, King, JG, Sartori LM, Maciel-de-Freitas R, Gomes MGM. Reply to: “Enhancement of Aedes aegypti susceptibility to dengue by Wolbachia is not supported”. Nature Comunications 2020;11: 6113. [doi: 10.1038/s41467-020-19831-5]
12. Souto-Maior C, Serrano Negron, YL Harbison ST. Natural selection on sleep duration in Drosophila melanogaster. Scientific Reports 2020;10: 20652. [doi: 10.1038/s41598-020-77680-0]
11. King JG§, Souto-Maior C§, Sartori L, Maciel-de-Freitas R, Gomes MGM. Variation in Wolbachia effects on Aedes mosquitoes as a determinant of invasiveness and vectorial capacity. Nature Communications 2018;9: 1483. [doi: 10.1038/s41467-018-03981-8]
10. Souto-Maior C§, Sylvestre G§, Dias FBS, Gomes MGM, Maciel-De-Freitas R. Model-based inference from multiple dose, time course data reveals Wolbachia effects on infection profiles of type 1 dengue virus in Aedes aegypti. PLoS Negl Trop Dis 2018;12:e0006339. [doi: 10.1371/journal.pntd.0006339] [data] [code]
9. Souto-Maior C, Rasmussen DA, Maciel-De-Freitas R, Gomes MGM. A51 Dengue virus multi-strain models as hypotheses for serotype interaction. Virus Evol. 2017;3(Suppl 1):vew036.050. [doi: 10.1093/ve/vew036.050]
8. Gomes MGM, Gjini E, Lopes JS, Souto-Maior C, Rebelo C. A theoretical framework to identify invariant thresholds in infectious disease epidemiology. J Theor Biol. 2016 21;395:97-102. [doi: 10.1016/j.jtbi.2016.01.029]
7. Souto-Maior C, Lopes JS, Gjini E, Struchiner CJ, Teixeira L, Gomes MGM. Heterogeneity in symbiotic effects facilitates Wolbachia establishment in insect populations. Theoretical Ecology 2015;8:53–65. [doi: 10.1007/s12080-014-0235-7]
6. Pessoa D, Souto-Maior C, Gjini E, et al. Unveiling Time in Dose-Response Models to Infer Host Susceptibility to Pathogens. PLoS Comput Biol 2014;10:e1003773. [doi: 10.1371/journal.pcbi.1003773] [data] [code]
preprints
5. Souto-Maior C. “Extraordinarily corrupt or statistically commonplace? Reproducibility crises may stem from a lack of understanding of outcome probabilities”. Phil Sci Archive 2022
4. Souto-Maior C, Lin Y, Serrano Negron YL, Harbison ST. “Multiple shifts in gene network interactions shape phenotypes of Drosophila melanogaster selected for long and short night sleep duration”. bioRxiv 2021; 2021.07.11.451943. [doi: 10.1101/2021.07.11.451943]
3. Gomes MGM, Corder RM, King JG, Langwig KE, Souto-Maior C, Carneiro J, Penha-Goncalves C, Ferreira MU, Aguas R. Individual variation in susceptibility or exposure to SARS-CoV-2 lowers the herd immunity threshold medRxiv 2020:20081893; [doi: 10.1101/2020.04.27.20081893]
2. Souto-Maior C. Multiple-serotype models of dengue virus transmission: simulation study and perspectives for the application of inference in epidemiological surveillance bioRxiv 2019:583351; [doi: 10.1101/583351]
book chapters and others
1. Souto-Maior C. “Host–Symbiont–Pathogen–Host Interactions: Wolbachia, Vector-Transmitted Human Pathogens, and the Importance of Quantitative Models of Multipartite Coevolution”. In. Reticul. Evol. Symbiogenesis, Lateral Gene Transf. Hybrid. Infect. Hered. Gontier, Nathalie (Ed.) 2015 pp 207–230.